Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RCCD1A6NED2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 SNX18-202ENST00000343017 3140 ntBASIC17.16■□□□□ 0.34
RCCD1A6NED2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 RHOQP3-201ENST00000437982 621 ntBASIC17.16■□□□□ 0.34
RCCD1A6NED2 AC098831.1-202ENST00000438821 336 ntBASIC17.16■□□□□ 0.34
RCCD1A6NED2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.16■□□□□ 0.34
RCCD1A6NED2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RCCD1A6NED2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.15■□□□□ 0.34
RCCD1A6NED2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 UNC93B6-202ENST00000528242 690 ntBASIC17.15■□□□□ 0.34
RCCD1A6NED2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 AC006213.4-201ENST00000616184 634 ntBASIC17.15■□□□□ 0.34
RCCD1A6NED2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 AP001282.1-201ENST00000531301 1499 ntBASIC17.15■□□□□ 0.34
RCCD1A6NED2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.15■□□□□ 0.34
RCCD1A6NED2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RCCD1A6NED2 FAM45BP-202ENST00000592932 1624 ntBASIC17.14■□□□□ 0.33
RCCD1A6NED2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCCD1A6NED2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCCD1A6NED2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RCCD1A6NED2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RCCD1A6NED2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms