Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 AP001094.4-201ENST00000579008 2176 ntBASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 AL607033.1-201ENST00000623900 1599 ntBASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LOC102724428A0A0B4J2F2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 AL022328.3-201ENST00000607943 679 ntBASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LOC102724428A0A0B4J2F2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC006001.1-201ENST00000325130 474 ntBASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC093813.1-201ENST00000605066 256 ntBASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.23■□□□□ 0.83
LOC102724428A0A0B4J2F2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 AP001258.2-201ENST00000529891 490 ntBASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LOC102724428A0A0B4J2F2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LOC102724428A0A0B4J2F2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms