Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 AC092474.2-201ENST00000424288 719 ntBASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRGV1A0A0A0MS02 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
TRGV1A0A0A0MS02 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
TRGV1A0A0A0MS02 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
TRGV1A0A0A0MS02 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
TRGV1A0A0A0MS02 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
TRGV1A0A0A0MS02 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRGV1A0A0A0MS02 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
TRGV1A0A0A0MS02 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.77□□□□□ -0.52
TRGV1A0A0A0MS02 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
TRGV1A0A0A0MS02 HYMAI-201ENST00000635591 3347 ntBASIC11.77□□□□□ -0.52
TRGV1A0A0A0MS02 AP003680.1-201ENST00000598970 3660 ntBASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 PAUPAR-201ENST00000630360 2965 ntBASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 WASH6P-202ENST00000359512 1437 ntBASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TRGV1A0A0A0MS02 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.76□□□□□ -0.53
TRGV1A0A0A0MS02 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms