Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 AC104982.3-201ENST00000581995 514 ntBASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 GGT4P-201ENST00000623672 1708 ntBASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCH2Q9Y6C5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCH2Q9Y6C5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTCH2Q9Y6C5 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTCH2Q9Y6C5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCH2Q9Y6C5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
PTCH2Q9Y6C5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.02■□□□□ 0.47
PTCH2Q9Y6C5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PTCH2Q9Y6C5 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCH2Q9Y6C5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 AC006001.1-201ENST00000325130 474 ntBASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 TOMM22P5-201ENST00000416399 439 ntBASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 FAM197Y7-201ENST00000432892 766 ntBASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 RN7SL769P-201ENST00000469386 295 ntBASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 AC022137.2-201ENST00000503482 481 ntBASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 AC078819.1-201ENST00000547454 765 ntBASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 AC012085.1-201ENST00000548270 765 ntBASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 AC025279.2-201ENST00000569730 653 ntBASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 AC139713.2-201ENST00000641328 2723 ntBASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCH2Q9Y6C5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 AC104457.1-201ENST00000401024 814 ntBASIC18■□□□□ 0.47
PTCH2Q9Y6C5 KRTAP10-13P-201ENST00000412914 571 ntBASIC18■□□□□ 0.47
PTCH2Q9Y6C5 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 MTX1P1-201ENST00000440904 838 ntBASIC18■□□□□ 0.47
PTCH2Q9Y6C5 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 AC138627.1-207ENST00000641560 1006 ntBASIC18■□□□□ 0.47
PTCH2Q9Y6C5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PTCH2Q9Y6C5 OR6D1P-202ENST00000641007 5290 ntBASIC18■□□□□ 0.47
PTCH2Q9Y6C5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms