Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 AC134407.2-201ENST00000625089 1978 ntBASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 RN7SL589P-201ENST00000481268 310 ntBASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 AC061975.2-201ENST00000581722 295 ntBASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CYP46A1Q9Y6A2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 PGAM5P1-201ENST00000518923 814 ntBASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 AC243562.1-201ENST00000560672 389 ntBASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CYP46A1Q9Y6A2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CYP46A1Q9Y6A2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.14■□□□□ 0.66
CYP46A1Q9Y6A2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CYP46A1Q9Y6A2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CYP46A1Q9Y6A2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CYP46A1Q9Y6A2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CYP46A1Q9Y6A2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.14■□□□□ 0.66
CYP46A1Q9Y6A2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CYP46A1Q9Y6A2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.14■□□□□ 0.66
CYP46A1Q9Y6A2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 AL022342.1-201ENST00000400363 863 ntBASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 AC142381.1-201ENST00000426099 345 ntBASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 POLD2P1-201ENST00000511220 997 ntBASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 HYMAI-201ENST00000635591 3347 ntBASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.14■□□□□ 0.65
CYP46A1Q9Y6A2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms