Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 AC120045.2-201ENST00000567334 178 ntBASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 CLUHP6-201ENST00000580789 941 ntBASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 AC103810.3-201ENST00000583567 96 ntBASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HCFC2Q9Y5Z7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 MSTO2P-201ENST00000314835 1709 ntBASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 AC009486.1-201ENST00000569860 813 ntBASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HCFC2Q9Y5Z7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HCFC2Q9Y5Z7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HCFC2Q9Y5Z7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
HCFC2Q9Y5Z7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.26
HCFC2Q9Y5Z7 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.71■□□□□ 0.26
HCFC2Q9Y5Z7 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 YBX1P6-201ENST00000442962 1002 ntBASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 PFN1P12-201ENST00000455938 534 ntBASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 VDAC1P7-201ENST00000462417 847 ntBASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 SLED1-202ENST00000512051 380 ntBASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 AC068587.10-201ENST00000641210 219 ntBASIC16.7■□□□□ 0.26
HCFC2Q9Y5Z7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms