Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF216Q9NWF9 AC093010.1-201ENST00000473625 1624 ntBASIC19.25■□□□□ 0.67
RNF216Q9NWF9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF216Q9NWF9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
RNF216Q9NWF9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF216Q9NWF9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF216Q9NWF9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF216Q9NWF9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF216Q9NWF9 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF216Q9NWF9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 TMED5-201ENST00000370280 750 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AC026117.1-201ENST00000509658 883 ntBASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AC009800.1-201ENST00000511357 1006 ntBASIC19.24■□□□□ 0.67
RNF216Q9NWF9 UNC93B6-202ENST00000528242 690 ntBASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AC090092.1-202ENST00000533591 685 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AC051619.5-203ENST00000561404 529 ntTSL 4 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AL589182.2-201ENST00000619332 1049 ntBASIC19.24■□□□□ 0.67
RNF216Q9NWF9 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF216Q9NWF9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AC006116.8-202ENST00000587620 1550 ntBASIC19.23■□□□□ 0.67
RNF216Q9NWF9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AP001094.4-201ENST00000579008 2176 ntBASIC19.23■□□□□ 0.67
RNF216Q9NWF9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 CIB4-201ENST00000288861 773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 GNAS-209ENST00000371081 730 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 UPF3AP3-201ENST00000420996 769 ntBASIC19.23■□□□□ 0.67
RNF216Q9NWF9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AC005104.2-201ENST00000427818 678 ntBASIC19.23■□□□□ 0.67
RNF216Q9NWF9 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF216Q9NWF9 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms