Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR9Q9NR96 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.04■□□□□ 0.32
TLR9Q9NR96 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR9Q9NR96 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TLR9Q9NR96 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TLR9Q9NR96 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TLR9Q9NR96 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.04■□□□□ 0.32
TLR9Q9NR96 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.04■□□□□ 0.32
TLR9Q9NR96 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR9Q9NR96 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.04■□□□□ 0.32
TLR9Q9NR96 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR9Q9NR96 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TLR9Q9NR96 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TLR9Q9NR96 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.03■□□□□ 0.32
TLR9Q9NR96 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.03■□□□□ 0.32
TLR9Q9NR96 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.03■□□□□ 0.32
TLR9Q9NR96 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TLR9Q9NR96 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.03■□□□□ 0.32
TLR9Q9NR96 MIR5189-201ENST00000577370 114 ntBASIC17.03■□□□□ 0.32
TLR9Q9NR96 RN7SL219P-201ENST00000582872 296 ntBASIC17.03■□□□□ 0.32
TLR9Q9NR96 AL022328.1-201ENST00000610050 478 ntBASIC17.03■□□□□ 0.32
TLR9Q9NR96 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.03■□□□□ 0.32
TLR9Q9NR96 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.03■□□□□ 0.32
TLR9Q9NR96 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.03■□□□□ 0.32
TLR9Q9NR96 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TLR9Q9NR96 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TLR9Q9NR96 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TLR9Q9NR96 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR9Q9NR96 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TLR9Q9NR96 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TLR9Q9NR96 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR9Q9NR96 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TLR9Q9NR96 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.02■□□□□ 0.32
TLR9Q9NR96 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 ACTG1P3-201ENST00000431775 1114 ntBASIC17.02■□□□□ 0.32
TLR9Q9NR96 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TLR9Q9NR96 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 TDH-203ENST00000531764 1110 ntBASIC17.02■□□□□ 0.32
TLR9Q9NR96 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TLR9Q9NR96 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TLR9Q9NR96 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
TLR9Q9NR96 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TLR9Q9NR96 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TLR9Q9NR96 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TLR9Q9NR96 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TLR9Q9NR96 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.02■□□□□ 0.31
TLR9Q9NR96 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TLR9Q9NR96 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TLR9Q9NR96 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR9Q9NR96 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TLR9Q9NR96 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR9Q9NR96 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR9Q9NR96 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR9Q9NR96 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR9Q9NR96 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TLR9Q9NR96 AC004987.2-201ENST00000395959 1148 ntBASIC17.01■□□□□ 0.31
TLR9Q9NR96 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 AL583810.1-201ENST00000553344 1045 ntBASIC17.01■□□□□ 0.31
TLR9Q9NR96 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.01■□□□□ 0.31
TLR9Q9NR96 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms