Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 AL645728.1-201ENST00000366221 2101 ntBASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 UPF3AP3-201ENST00000420996 769 ntBASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLK4Q9HAZ1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 AKAP8P1-201ENST00000434743 1349 ntBASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 YBX1P5-201ENST00000509441 847 ntBASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 AL603832.2-201ENST00000566195 2125 ntBASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLK4Q9HAZ1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms