Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 ZSWIM1-201ENST00000372520 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AL672167.1-206ENST00000356293 943 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 MIR16-2-201ENST00000362117 81 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AL451142.1-201ENST00000375867 775 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 SNORA19-201ENST00000384737 128 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 RN7SKP218-201ENST00000410222 292 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 RPL7P8-201ENST00000411964 730 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 HMGN1P37-201ENST00000413805 303 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 PPP1R12BP2-201ENST00000416956 639 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC098592.1-201ENST00000419352 333 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 UPF3AP3-201ENST00000420996 769 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 HSD52-201ENST00000425914 1111 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AL596330.1-201ENST00000431691 837 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 TCEA1P3-201ENST00000443005 880 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 YWHAQP9-201ENST00000445891 512 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 DANT1-202ENST00000451869 444 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 HYI-210ENST00000486909 905 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC021146.2-201ENST00000504736 556 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC114812.4-201ENST00000506676 757 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC021001.1-201ENST00000518703 987 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AL355075.4-201ENST00000554988 638 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AP002478.2-201ENST00000584060 557 ntTSL 4 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 MIMT1-201ENST00000597105 1050 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC055822.1-201ENST00000606067 445 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC019193.2-201ENST00000610012 634 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 LINC01632-202ENST00000617368 533 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 SRP54-AS1-205ENST00000636540 565 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 PABPC1P11-201ENST00000428966 2007 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 ATP9B-203ENST00000458297 1507 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 JAML-211ENST00000533261 1508 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 AC139700.1-201ENST00000605810 1540 ntBASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
KRTAP3-2Q9BYR7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-2Q9BYR7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
KRTAP3-2Q9BYR7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms