Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CC2D2A-216ENST00000515124 1474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP3-3Q9BYR6 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 MTND5P26-201ENST00000426018 1752 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 EPS15P1-202ENST00000459691 2071 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 HMGB1P39-201ENST00000366304 880 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 RN7SKP181-201ENST00000411188 316 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 RPL3P2-204ENST00000413027 1203 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AL136366.1-201ENST00000416996 964 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 RPL21P111-201ENST00000418453 477 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC245060.3-201ENST00000432623 1242 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC096540.1-201ENST00000436207 661 ntTSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC092427.1-201ENST00000439177 601 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC092568.1-201ENST00000440950 1284 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 COX6CP2-201ENST00000444980 225 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AL592546.1-201ENST00000448834 692 ntTSL 3 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 FTH1P4-201ENST00000480365 553 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 HMGN1P12-201ENST00000499125 195 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 RNF138P1-201ENST00000502765 546 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 LECT2-204ENST00000514447 789 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 MTHFD2P4-201ENST00000515074 1025 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 SNORD116-30-201ENST00000516468 85 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 DCTN6-203ENST00000520829 880 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC008269.2-201ENST00000561915 1105 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 EIF1P5-201ENST00000585002 234 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 G6PC-202ENST00000585489 1097 ntTSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 CYP2B7P-204ENST00000599831 1272 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 U73023.1-201ENST00000603134 700 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC009027.1-201ENST00000604510 479 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 COX6CP4-201ENST00000605798 228 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AP000255.1-201ENST00000610276 676 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC002401.4-201ENST00000612365 583 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC012593.1-216ENST00000626183 444 ntTSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 FOXCUT-201ENST00000628509 333 ntTSL 3 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 ZNRD1ASP-221ENST00000637794 1074 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 CD160-201ENST00000235933 1425 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC01480-204ENST00000597199 1718 ntBASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 LAMP3-202ENST00000466939 1453 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
KRTAP3-3Q9BYR6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 AL157777.2-201ENST00000258070 137 ntBASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 HMGN1P35-201ENST00000303758 594 ntBASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 OR13C5-201ENST00000374779 957 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 SERBP1P1-201ENST00000396021 1160 ntBASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 GCNT2-205ENST00000410107 1255 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC10.28□□□□□ -0.76
KRTAP3-3Q9BYR6 HNRNPA1P70-201ENST00000420836 1087 ntBASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms