Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 HLA-DPB2-205ENST00000435074 1188 ntBASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 AC104306.2-201ENST00000451877 341 ntBASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 IGHJ2P-201ENST00000454480 60 ntBASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 POU5F1P6-201ENST00000466990 990 ntBASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 AC026410.3-201ENST00000514280 936 ntBASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 ACTG1P17-201ENST00000558391 1119 ntBASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 AC009486.1-201ENST00000569860 813 ntBASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 MIR4741-201ENST00000579822 90 ntBASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 AC000095.1-201ENST00000603208 874 ntBASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
KRTAP4-1Q9BYQ7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 FLJ38576-201ENST00000623820 2459 ntBASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 AC007969.1-201ENST00000433675 447 ntBASIC8.23□□□□□ -1.09
KRTAP4-1Q9BYQ7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms