Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 AC136632.2-201ENST00000512891 861 ntBASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 AC012640.2-201ENST00000561606 901 ntBASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 MIR1199-201ENST00000621445 119 ntBASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
THUMPD3Q9BV44 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 AP002414.3-201ENST00000589352 1468 ntBASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 MYO15B-237ENST00000642007 4893 ntBASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 AL356488.2-201ENST00000602755 427 ntBASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 AL773604.1-201ENST00000617417 272 ntBASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 PGM5P2-202ENST00000637225 1043 ntBASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.52■□□□□ 0.08
THUMPD3Q9BV44 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 U82695.1-201ENST00000635752 1889 ntBASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
THUMPD3Q9BV44 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 MRPL3P1-201ENST00000400109 1033 ntBASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 AL031284.1-201ENST00000419297 478 ntBASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 FAM215A-202ENST00000632077 792 ntBASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 AC012569.1-201ENST00000591191 1524 ntBASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 AC092850.2-201ENST00000623821 2697 ntBASIC15.51■□□□□ 0.07
THUMPD3Q9BV44 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms