Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.9□□□□□ -0.18
CMSS1Q9BQ75 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
CMSS1Q9BQ75 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
CMSS1Q9BQ75 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 OR2I1P-209ENST00000641730 5365 ntBASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 AL359258.3-201ENST00000622910 2331 ntBASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 LAGE3P1-201ENST00000425356 484 ntBASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 AC097376.2-205ENST00000610159 5334 ntBASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CMSS1Q9BQ75 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 AC139749.1-202ENST00000617529 3139 ntBASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 AC079781.5-202ENST00000641784 3743 ntBASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 AC069224.1-201ENST00000566372 1715 ntBASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CMSS1Q9BQ75 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms