Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 RN7SL204P-201ENST00000582831 262 ntBASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 LINC02560-201ENST00000596379 459 ntBASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 PCDHA14-201ENST00000506751 2298 ntBASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CDK5RAP1Q96SZ6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 AC236430.1-201ENST00000402231 743 ntBASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 AC009407.1-201ENST00000568958 598 ntBASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDK5RAP1Q96SZ6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.71■□□□□ 0.26
CDK5RAP1Q96SZ6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDK5RAP1Q96SZ6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDK5RAP1Q96SZ6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CDK5RAP1Q96SZ6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDK5RAP1Q96SZ6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP1Q96SZ6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP1Q96SZ6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms