Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDK5RAP2Q96SN8 DRD5P1-201ENST00000456605 1438 ntBASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 AL603832.2-201ENST00000566195 2125 ntBASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 MSTO2P-201ENST00000314835 1709 ntBASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 AC005229.1-201ENST00000392885 409 ntBASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 AL359711.2-201ENST00000563105 872 ntBASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 AL008721.1-201ENST00000609964 604 ntBASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDK5RAP2Q96SN8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 AC134915.1-201ENST00000426461 574 ntBASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 AC011495.1-201ENST00000498085 584 ntBASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 AL162274.1-201ENST00000617191 1098 ntBASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 PCDHB19P-201ENST00000570871 2371 ntBASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 AC012441.1-201ENST00000446669 685 ntBASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 CROCCP4-201ENST00000457096 498 ntBASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 AC133539.2-201ENST00000604757 467 ntBASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDK5RAP2Q96SN8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.66■□□□□ 0.58
CDK5RAP2Q96SN8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK5RAP2Q96SN8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms