Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 AC073592.5-201ENST00000624854 528 ntBASIC12.3□□□□□ -0.44
AP1S3Q96PC3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 AC132938.5-201ENST00000624980 1813 ntBASIC12.3□□□□□ -0.44
AP1S3Q96PC3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AP1S3Q96PC3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 TERF1P1-201ENST00000311003 1181 ntBASIC12.29□□□□□ -0.44
AP1S3Q96PC3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 ACTG1P4-201ENST00000425123 1122 ntBASIC12.29□□□□□ -0.44
AP1S3Q96PC3 TSPY22P-201ENST00000427496 604 ntBASIC12.29□□□□□ -0.44
AP1S3Q96PC3 AC246785.2-201ENST00000432512 513 ntBASIC12.29□□□□□ -0.44
AP1S3Q96PC3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 RN7SL606P-201ENST00000472779 293 ntBASIC12.29□□□□□ -0.44
AP1S3Q96PC3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 IGHV3-41-201ENST00000613121 348 ntBASIC12.29□□□□□ -0.44
AP1S3Q96PC3 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
AP1S3Q96PC3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AP1S3Q96PC3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms