Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMTM3Q96MX0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 PI4KAP1-204ENST00000612579 1703 ntBASIC13.93□□□□□ -0.18
CMTM3Q96MX0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 AP005117.1-201ENST00000584346 1413 ntBASIC13.93□□□□□ -0.18
CMTM3Q96MX0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 AC063952.2-201ENST00000498792 1227 ntBASIC13.93□□□□□ -0.18
CMTM3Q96MX0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 AC006011.2-201ENST00000621313 1158 ntBASIC13.93□□□□□ -0.18
CMTM3Q96MX0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 FGD5P1-202ENST00000614866 2498 ntBASIC13.93□□□□□ -0.18
CMTM3Q96MX0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 SNX18-202ENST00000343017 3140 ntBASIC13.93□□□□□ -0.18
CMTM3Q96MX0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 AC104581.4-201ENST00000623126 3052 ntBASIC13.93□□□□□ -0.18
CMTM3Q96MX0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CMTM3Q96MX0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 AC092127.1-201ENST00000567093 3455 ntBASIC13.92□□□□□ -0.18
CMTM3Q96MX0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 AC021097.1-201ENST00000607902 574 ntBASIC13.92□□□□□ -0.18
CMTM3Q96MX0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.92□□□□□ -0.18
CMTM3Q96MX0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms