Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SUSD3Q96L08 AC020916.1-201ENST00000587762 1774 ntBASIC16.98■□□□□ 0.31
SUSD3Q96L08 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.98■□□□□ 0.31
SUSD3Q96L08 AC136604.1-201ENST00000418535 575 ntBASIC16.98■□□□□ 0.31
SUSD3Q96L08 AC098850.1-201ENST00000419919 790 ntBASIC16.98■□□□□ 0.31
SUSD3Q96L08 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.98■□□□□ 0.31
SUSD3Q96L08 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.98■□□□□ 0.31
SUSD3Q96L08 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.98■□□□□ 0.31
SUSD3Q96L08 ELK1P1-201ENST00000485699 580 ntBASIC16.98■□□□□ 0.31
SUSD3Q96L08 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.98■□□□□ 0.31
SUSD3Q96L08 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 HNRNPUP1-201ENST00000554987 333 ntBASIC16.98■□□□□ 0.31
SUSD3Q96L08 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.98■□□□□ 0.31
SUSD3Q96L08 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SUSD3Q96L08 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.98■□□□□ 0.31
SUSD3Q96L08 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SUSD3Q96L08 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SUSD3Q96L08 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 KRT17P7-201ENST00000451704 1104 ntBASIC16.97■□□□□ 0.31
SUSD3Q96L08 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 OR6D1P-203ENST00000641209 4860 ntBASIC16.97■□□□□ 0.31
SUSD3Q96L08 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 MTHFR-217ENST00000641820 1569 ntBASIC16.97■□□□□ 0.31
SUSD3Q96L08 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SUSD3Q96L08 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
SUSD3Q96L08 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUSD3Q96L08 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUSD3Q96L08 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUSD3Q96L08 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 RN7SL752P-201ENST00000463779 287 ntBASIC16.96■□□□□ 0.31
SUSD3Q96L08 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 CTBP2P3-201ENST00000585629 1255 ntBASIC16.96■□□□□ 0.31
SUSD3Q96L08 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SUSD3Q96L08 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SUSD3Q96L08 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUSD3Q96L08 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUSD3Q96L08 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SUSD3Q96L08 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUSD3Q96L08 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUSD3Q96L08 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUSD3Q96L08 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SUSD3Q96L08 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SUSD3Q96L08 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SUSD3Q96L08 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SUSD3Q96L08 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms