Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP6V0A1Q93050 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP6V0A1Q93050 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.02■□□□□ 0.47
ATP6V0A1Q93050 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ATP6V0A1Q93050 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.02■□□□□ 0.47
ATP6V0A1Q93050 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP6V0A1Q93050 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 AC011270.2-201ENST00000624293 2550 ntBASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 OR8S1-201ENST00000310194 1080 ntBASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 DFFBP1-201ENST00000433250 979 ntBASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 DOC2GP-202ENST00000514950 1163 ntBASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 AL033527.5-202ENST00000641632 1098 ntBASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 AC138969.3-201ENST00000546612 1459 ntBASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 AC138932.2-201ENST00000548268 1459 ntBASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 AC126755.4-201ENST00000549796 1459 ntBASIC18.01■□□□□ 0.47
ATP6V0A1Q93050 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 AL691432.1-201ENST00000596308 1422 ntBASIC18■□□□□ 0.47
ATP6V0A1Q93050 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 AC004987.2-201ENST00000395959 1148 ntBASIC18■□□□□ 0.47
ATP6V0A1Q93050 OSM-203ENST00000403463 464 ntTSL 3 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 AC087499.6-201ENST00000411576 835 ntBASIC18■□□□□ 0.47
ATP6V0A1Q93050 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 MEIS3P1-201ENST00000495167 958 ntBASIC18■□□□□ 0.47
ATP6V0A1Q93050 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP6V0A1Q93050 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18■□□□□ 0.47
ATP6V0A1Q93050 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.99■□□□□ 0.47
ATP6V0A1Q93050 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ATP6V0A1Q93050 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP6V0A1Q93050 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP6V0A1Q93050 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms