Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM3Q8TF72 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM3Q8TF72 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.41■□□□□ 0.22
SHROOM3Q8TF72 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.41■□□□□ 0.22
SHROOM3Q8TF72 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHROOM3Q8TF72 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.41■□□□□ 0.22
SHROOM3Q8TF72 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 MIR661-201ENST00000384842 89 ntBASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 AC069120.2-201ENST00000524091 540 ntBASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 KRT8P37-201ENST00000451609 1420 ntBASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 AL691432.1-201ENST00000596308 1422 ntBASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 GAPDHP21-201ENST00000450301 1010 ntBASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 AC004835.2-201ENST00000603762 682 ntBASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHROOM3Q8TF72 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 AC140878.1-201ENST00000565277 250 ntBASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.39■□□□□ 0.21
SHROOM3Q8TF72 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.38■□□□□ 0.21
SHROOM3Q8TF72 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SHROOM3Q8TF72 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHROOM3Q8TF72 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.38■□□□□ 0.21
SHROOM3Q8TF72 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHROOM3Q8TF72 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHROOM3Q8TF72 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.38■□□□□ 0.21
SHROOM3Q8TF72 AC025678.2-201ENST00000562061 970 ntBASIC16.38■□□□□ 0.21
SHROOM3Q8TF72 AL138828.2-201ENST00000615812 383 ntBASIC16.38■□□□□ 0.21
SHROOM3Q8TF72 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms