Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 AL365330.1-201ENST00000607459 531 ntBASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAF3IP1Q8TDR0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TRAF3IP1Q8TDR0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAF3IP1Q8TDR0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 AP002472.1-201ENST00000577490 586 ntBASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 AC092865.6-201ENST00000642101 219 ntBASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAF3IP1Q8TDR0 PRAL-201ENST00000624952 3286 ntBASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 RARRES2P8-201ENST00000566335 367 ntBASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAF3IP1Q8TDR0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP1Q8TDR0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP1Q8TDR0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP1Q8TDR0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAF3IP1Q8TDR0 AC069224.1-201ENST00000566372 1715 ntBASIC16.87■□□□□ 0.29
TRAF3IP1Q8TDR0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAF3IP1Q8TDR0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAF3IP1Q8TDR0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAF3IP1Q8TDR0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms