Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC025181.2-201ENST00000606994 802 ntBASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 CTBP2P4-201ENST00000513884 920 ntBASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 AC243562.2-201ENST00000561247 970 ntBASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
ALMS1Q8TCU4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 IGLV3-15-201ENST00000518356 244 ntBASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 AC073413.1-201ENST00000603927 732 ntBASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 AC007274.2-201ENST00000421675 662 ntBASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 AL391280.1-201ENST00000506969 1062 ntBASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 COX5BP1-201ENST00000507622 393 ntBASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 EEF1DP6-201ENST00000449232 372 ntBASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 PRSS30P-206ENST00000641773 873 ntBASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC10.62□□□□□ -0.71
ALMS1Q8TCU4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
ALMS1Q8TCU4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms