Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDND2Q8NHS1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 AL671710.1-201ENST00000610245 2349 ntBASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 PRYP6-201ENST00000514804 343 ntBASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 MIR4453-201ENST00000584019 89 ntBASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 AL158211.3-201ENST00000607385 239 ntBASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 AL390754.1-201ENST00000619088 582 ntBASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 AC092384.3-202ENST00000564646 2873 ntBASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDND2Q8NHS1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 AL035633.1-201ENST00000406139 838 ntBASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 RARRES2P9-201ENST00000565168 469 ntBASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 AP3S2-216ENST00000617003 1561 ntBASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDND2Q8NHS1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CLDND2Q8NHS1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.77□□□□□ -0.2
CLDND2Q8NHS1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CLDND2Q8NHS1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDND2Q8NHS1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CLDND2Q8NHS1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.2
CLDND2Q8NHS1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDND2Q8NHS1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms