Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 AC099522.2-201ENST00000607001 744 ntBASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 AC092865.6-201ENST00000642101 219 ntBASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSMEM1Q8N8F7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 RARRES2P8-201ENST00000566335 367 ntBASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 AKAP8P1-201ENST00000434743 1349 ntBASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LSMEM1Q8N8F7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.83□□□□□ -0.03
LSMEM1Q8N8F7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
LSMEM1Q8N8F7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LSMEM1Q8N8F7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LSMEM1Q8N8F7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.83□□□□□ -0.03
LSMEM1Q8N8F7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LSMEM1Q8N8F7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LSMEM1Q8N8F7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
LSMEM1Q8N8F7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
LSMEM1Q8N8F7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms