Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
TTC9CQ8N5M4 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 AL136379.1-201ENST00000623471 2642 ntBASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 HAUS4P1-201ENST00000406739 1145 ntBASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 SPDYE11-202ENST00000450699 704 ntBASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 SPDYE9P-201ENST00000570642 692 ntBASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 AC027307.2-201ENST00000591252 911 ntBASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 AL671883.3-201ENST00000603274 991 ntBASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 SPDYE10P-202ENST00000612005 668 ntBASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 SPDYE8P-202ENST00000612377 668 ntBASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 CDC14C-201ENST00000428251 1719 ntBASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TTC9CQ8N5M4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 AC069224.1-201ENST00000566372 1715 ntBASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 C8orf49-201ENST00000525043 1968 ntBASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
TTC9CQ8N5M4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms