Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 AL442647.2-201ENST00000429864 857 ntBASIC17.4■□□□□ 0.38
HERC6Q8IVU3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 AC036164.1-201ENST00000570544 333 ntBASIC17.4■□□□□ 0.38
HERC6Q8IVU3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 AC133539.2-201ENST00000604757 467 ntBASIC17.4■□□□□ 0.38
HERC6Q8IVU3 AL391069.4-201ENST00000609583 481 ntBASIC17.4■□□□□ 0.38
HERC6Q8IVU3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HERC6Q8IVU3 AL391256.1-201ENST00000443260 1855 ntBASIC17.39■□□□□ 0.38
HERC6Q8IVU3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.39■□□□□ 0.38
HERC6Q8IVU3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.39■□□□□ 0.37
HERC6Q8IVU3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 FAM21FP-201ENST00000426241 1131 ntBASIC17.39■□□□□ 0.37
HERC6Q8IVU3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 FO681548.1-201ENST00000455617 1132 ntBASIC17.39■□□□□ 0.37
HERC6Q8IVU3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 TDH-203ENST00000531764 1110 ntBASIC17.39■□□□□ 0.37
HERC6Q8IVU3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HERC6Q8IVU3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 CYP4F24P-201ENST00000586049 1580 ntBASIC17.38■□□□□ 0.37
HERC6Q8IVU3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HERC6Q8IVU3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms