Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 HAUS4P1-201ENST00000406739 1145 ntBASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 FGFR3P6-201ENST00000457012 610 ntBASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 RPS15P9-201ENST00000494093 319 ntBASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 KRT18P21-201ENST00000515767 1272 ntBASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NUDCD3Q8IVD9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 AC138035.3-201ENST00000622706 2791 ntBASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 SCARNA2-201ENST00000458748 420 ntBASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 AC008608.2-201ENST00000606089 416 ntBASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NUDCD3Q8IVD9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.09■□□□□ 0.17
NUDCD3Q8IVD9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms