Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 AC126755.1-201ENST00000525846 6405 ntBASIC14.45□□□□□ -0.1
LRRC28Q86X40 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 RPS15P9-201ENST00000494093 319 ntBASIC14.45□□□□□ -0.1
LRRC28Q86X40 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 AC034105.1-201ENST00000563488 319 ntBASIC14.45□□□□□ -0.1
LRRC28Q86X40 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
LRRC28Q86X40 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRC28Q86X40 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 PTCHD3P3-201ENST00000403073 906 ntBASIC14.44□□□□□ -0.1
LRRC28Q86X40 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 AC009947.1-201ENST00000444350 727 ntBASIC14.44□□□□□ -0.1
LRRC28Q86X40 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 AL671883.3-201ENST00000603274 991 ntBASIC14.44□□□□□ -0.1
LRRC28Q86X40 AC008667.4-201ENST00000607370 168 ntBASIC14.44□□□□□ -0.1
LRRC28Q86X40 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 AL805961.1-202ENST00000641562 540 ntBASIC14.44□□□□□ -0.1
LRRC28Q86X40 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 AL031731.1-201ENST00000642131 2094 ntBASIC14.44□□□□□ -0.1
LRRC28Q86X40 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.44□□□□□ -0.1
LRRC28Q86X40 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 TMBIM7P-203ENST00000641617 1718 ntBASIC14.44□□□□□ -0.1
LRRC28Q86X40 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRRC28Q86X40 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms