Protein–RNA interactions for Protein: Q7L099

RUFY3, Protein RUFY3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3Q7L099 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 HTR5BP-201ENST00000430851 1154 ntBASIC19.09■□□□□ 0.65
RUFY3Q7L099 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 ALG1L5P-201ENST00000482043 771 ntBASIC19.09■□□□□ 0.65
RUFY3Q7L099 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.09■□□□□ 0.65
RUFY3Q7L099 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RUFY3Q7L099 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RUFY3Q7L099 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RUFY3Q7L099 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.08■□□□□ 0.65
RUFY3Q7L099 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RUFY3Q7L099 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.08■□□□□ 0.65
RUFY3Q7L099 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.08■□□□□ 0.65
RUFY3Q7L099 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.08■□□□□ 0.65
RUFY3Q7L099 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.08■□□□□ 0.65
RUFY3Q7L099 CICP13-201ENST00000422015 2789 ntBASIC19.08■□□□□ 0.65
RUFY3Q7L099 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.08■□□□□ 0.65
RUFY3Q7L099 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RUFY3Q7L099 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RUFY3Q7L099 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RUFY3Q7L099 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.08■□□□□ 0.64
RUFY3Q7L099 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RUFY3Q7L099 AP000347.1-202ENST00000435868 847 ntBASIC19.08■□□□□ 0.64
RUFY3Q7L099 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.08■□□□□ 0.64
RUFY3Q7L099 KRT8P23-201ENST00000560090 1207 ntBASIC19.08■□□□□ 0.64
RUFY3Q7L099 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.08■□□□□ 0.64
RUFY3Q7L099 AC084121.4-201ENST00000641598 221 ntBASIC19.08■□□□□ 0.64
RUFY3Q7L099 AF228730.8-201ENST00000642140 221 ntBASIC19.08■□□□□ 0.64
RUFY3Q7L099 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.08■□□□□ 0.64
RUFY3Q7L099 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
RUFY3Q7L099 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RUFY3Q7L099 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.08■□□□□ 0.64
RUFY3Q7L099 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RUFY3Q7L099 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
RUFY3Q7L099 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
RUFY3Q7L099 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RUFY3Q7L099 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.08■□□□□ 0.64
RUFY3Q7L099 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.08■□□□□ 0.64
RUFY3Q7L099 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RUFY3Q7L099 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 TIMM8BP1-201ENST00000452384 211 ntBASIC19.07■□□□□ 0.64
RUFY3Q7L099 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 RNA5SP410-201ENST00000516285 106 ntBASIC19.07■□□□□ 0.64
RUFY3Q7L099 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RUFY3Q7L099 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RUFY3Q7L099 AC022532.1-201ENST00000624563 1728 ntBASIC19.07■□□□□ 0.64
RUFY3Q7L099 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms