Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
USP45Q70EL2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
USP45Q70EL2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.19■□□□□ 0.18
USP45Q70EL2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
USP45Q70EL2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
USP45Q70EL2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
USP45Q70EL2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
USP45Q70EL2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
USP45Q70EL2 PCDH8P1-201ENST00000428983 2773 ntBASIC16.18■□□□□ 0.18
USP45Q70EL2 AP001282.1-201ENST00000531301 1499 ntBASIC16.18■□□□□ 0.18
USP45Q70EL2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.18■□□□□ 0.18
USP45Q70EL2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.18■□□□□ 0.18
USP45Q70EL2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.18■□□□□ 0.18
USP45Q70EL2 IGHV3-42-201ENST00000520410 361 ntBASIC16.18■□□□□ 0.18
USP45Q70EL2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.18■□□□□ 0.18
USP45Q70EL2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.18■□□□□ 0.18
USP45Q70EL2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
USP45Q70EL2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.18■□□□□ 0.18
USP45Q70EL2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.18■□□□□ 0.18
USP45Q70EL2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
USP45Q70EL2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.18■□□□□ 0.18
USP45Q70EL2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.18■□□□□ 0.18
USP45Q70EL2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
USP45Q70EL2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
USP45Q70EL2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
USP45Q70EL2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
USP45Q70EL2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
USP45Q70EL2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
USP45Q70EL2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 FO538757.1-201ENST00000623083 1397 ntBASIC16.17■□□□□ 0.18
USP45Q70EL2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
USP45Q70EL2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
USP45Q70EL2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
USP45Q70EL2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
USP45Q70EL2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
USP45Q70EL2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
USP45Q70EL2 TREML5P-201ENST00000421694 576 ntBASIC16.17■□□□□ 0.18
USP45Q70EL2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.17■□□□□ 0.18
USP45Q70EL2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.17■□□□□ 0.18
USP45Q70EL2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.17■□□□□ 0.18
USP45Q70EL2 AL133215.2-201ENST00000609242 977 ntBASIC16.17■□□□□ 0.18
USP45Q70EL2 SPDYE12P-201ENST00000618416 771 ntBASIC16.17■□□□□ 0.18
USP45Q70EL2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
USP45Q70EL2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
USP45Q70EL2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
USP45Q70EL2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
USP45Q70EL2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.17■□□□□ 0.18
USP45Q70EL2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.17■□□□□ 0.18
USP45Q70EL2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.17■□□□□ 0.18
USP45Q70EL2 CYP4F24P-201ENST00000586049 1580 ntBASIC16.17■□□□□ 0.18
USP45Q70EL2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP45Q70EL2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
USP45Q70EL2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms