Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.02■□□□□ 0.8
RC3H1Q5TC82 AC104306.2-201ENST00000451877 341 ntBASIC20.02■□□□□ 0.8
RC3H1Q5TC82 OARD1-212ENST00000482515 832 ntTSL 2 BASIC20.02■□□□□ 0.8
RC3H1Q5TC82 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RC3H1Q5TC82 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RC3H1Q5TC82 AC078819.1-201ENST00000547454 765 ntBASIC20.02■□□□□ 0.8
RC3H1Q5TC82 AC012085.1-201ENST00000548270 765 ntBASIC20.02■□□□□ 0.8
RC3H1Q5TC82 AL008638.5-201ENST00000623814 1298 ntBASIC20.02■□□□□ 0.8
RC3H1Q5TC82 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RC3H1Q5TC82 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RC3H1Q5TC82 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RC3H1Q5TC82 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
RC3H1Q5TC82 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RC3H1Q5TC82 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
RC3H1Q5TC82 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.02■□□□□ 0.79
RC3H1Q5TC82 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RC3H1Q5TC82 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RC3H1Q5TC82 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RC3H1Q5TC82 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RC3H1Q5TC82 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RC3H1Q5TC82 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 AL138709.1-201ENST00000614840 1693 ntBASIC20.01■□□□□ 0.79
RC3H1Q5TC82 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC20.01■□□□□ 0.79
RC3H1Q5TC82 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RC3H1Q5TC82 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
RC3H1Q5TC82 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RC3H1Q5TC82 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20■□□□□ 0.79
RC3H1Q5TC82 AL133373.2-201ENST00000623187 2828 ntBASIC20■□□□□ 0.79
RC3H1Q5TC82 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20■□□□□ 0.79
RC3H1Q5TC82 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
RC3H1Q5TC82 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20■□□□□ 0.79
RC3H1Q5TC82 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20■□□□□ 0.79
RC3H1Q5TC82 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RC3H1Q5TC82 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20■□□□□ 0.79
RC3H1Q5TC82 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RC3H1Q5TC82 BTBD6P1-201ENST00000412176 1267 ntBASIC20■□□□□ 0.79
RC3H1Q5TC82 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RC3H1Q5TC82 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 AKR7A2P1-201ENST00000460134 915 ntBASIC20■□□□□ 0.79
RC3H1Q5TC82 ARTN-209ENST00000479128 471 ntTSL 3 BASIC20■□□□□ 0.79
RC3H1Q5TC82 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC20■□□□□ 0.79
RC3H1Q5TC82 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC20■□□□□ 0.79
RC3H1Q5TC82 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC20■□□□□ 0.79
RC3H1Q5TC82 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RC3H1Q5TC82 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC20■□□□□ 0.79
RC3H1Q5TC82 RETN-203ENST00000629642 400 ntTSL 5 BASIC20■□□□□ 0.79
RC3H1Q5TC82 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20■□□□□ 0.79
RC3H1Q5TC82 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20■□□□□ 0.79
RC3H1Q5TC82 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RC3H1Q5TC82 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20■□□□□ 0.79
RC3H1Q5TC82 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RC3H1Q5TC82 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RC3H1Q5TC82 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 AHCYP2-201ENST00000430630 1300 ntBASIC20■□□□□ 0.79
RC3H1Q5TC82 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RC3H1Q5TC82 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RC3H1Q5TC82 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms