Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HERC4Q5GLZ8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HERC4Q5GLZ8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HERC4Q5GLZ8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HERC4Q5GLZ8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HERC4Q5GLZ8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HERC4Q5GLZ8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
HERC4Q5GLZ8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.08■□□□□ 0.49
HERC4Q5GLZ8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HERC4Q5GLZ8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
HERC4Q5GLZ8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.08■□□□□ 0.49
HERC4Q5GLZ8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
HERC4Q5GLZ8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HERC4Q5GLZ8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.08■□□□□ 0.49
HERC4Q5GLZ8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HERC4Q5GLZ8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HERC4Q5GLZ8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 CNN2P2-201ENST00000443536 909 ntBASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 CNN2P3-201ENST00000450201 906 ntBASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 AL136317.3-201ENST00000618497 906 ntBASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HERC4Q5GLZ8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 AL627223.1-201ENST00000416693 442 ntBASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 CR383656.12-201ENST00000549567 513 ntBASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 LINC01225-203ENST00000563550 1244 ntBASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 SPTSSB-204ENST00000617024 1292 ntBASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.07■□□□□ 0.48
HERC4Q5GLZ8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 AC024909.3-201ENST00000611513 2257 ntBASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 AC098859.1-201ENST00000502915 1238 ntBASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 IGHV3-62-201ENST00000520057 340 ntBASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 AC051619.7-201ENST00000568314 623 ntBASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.06■□□□□ 0.48
HERC4Q5GLZ8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms