Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 HOMER2P2-201ENST00000451621 847 ntBASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 RPSAP36-202ENST00000494591 1261 ntBASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 AC120045.2-201ENST00000567334 178 ntBASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 MIR3907-201ENST00000579424 151 ntBASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 GNRHR2-203ENST00000581100 1187 ntBASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RSPO4Q2I0M5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RSPO4Q2I0M5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
RSPO4Q2I0M5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.52■□□□□ 0.07
RSPO4Q2I0M5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.52■□□□□ 0.07
RSPO4Q2I0M5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.52■□□□□ 0.07
RSPO4Q2I0M5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.52■□□□□ 0.07
RSPO4Q2I0M5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RSPO4Q2I0M5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RSPO4Q2I0M5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 AC104784.1-201ENST00000473096 294 ntBASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 AC134698.3-201ENST00000523880 214 ntBASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 IQSEC3P1-201ENST00000538799 536 ntBASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 AP001505.2-201ENST00000616815 443 ntBASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 FRMD8P1-201ENST00000440433 1524 ntBASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO4Q2I0M5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 AC006480.2-201ENST00000609770 1337 ntBASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 AC006001.1-201ENST00000325130 474 ntBASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.5■□□□□ 0.07
RSPO4Q2I0M5 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms