Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC21.2■□□□□ 0.98
COL16A1Q07092 AL353637.1-201ENST00000451571 732 ntBASIC21.2■□□□□ 0.98
COL16A1Q07092 IGLV3-15-201ENST00000518356 244 ntBASIC21.2■□□□□ 0.98
COL16A1Q07092 AL450472.2-201ENST00000603663 1156 ntBASIC21.2■□□□□ 0.98
COL16A1Q07092 AC087045.2-201ENST00000606279 1003 ntBASIC21.2■□□□□ 0.98
COL16A1Q07092 BX539320.1-201ENST00000623759 877 ntBASIC21.2■□□□□ 0.98
COL16A1Q07092 AL805961.1-203ENST00000641078 1258 ntBASIC21.2■□□□□ 0.98
COL16A1Q07092 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL16A1Q07092 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL16A1Q07092 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.2■□□□□ 0.98
COL16A1Q07092 AL603756.1-201ENST00000606511 2163 ntBASIC21.2■□□□□ 0.98
COL16A1Q07092 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.2■□□□□ 0.98
COL16A1Q07092 LINC01144-201ENST00000626198 1710 ntBASIC21.2■□□□□ 0.98
COL16A1Q07092 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL16A1Q07092 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL16A1Q07092 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 AC004408.2-201ENST00000623613 2777 ntBASIC21.19■□□□□ 0.98
COL16A1Q07092 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC21.19■□□□□ 0.98
COL16A1Q07092 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.19■□□□□ 0.98
COL16A1Q07092 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
COL16A1Q07092 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
COL16A1Q07092 SUN1-204ENST00000403868 978 ntTSL 2 BASIC21.19■□□□□ 0.98
COL16A1Q07092 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
COL16A1Q07092 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC21.19■□□□□ 0.98
COL16A1Q07092 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 ENPP7P14-201ENST00000621765 1040 ntBASIC21.19■□□□□ 0.98
COL16A1Q07092 AC009084.3-201ENST00000623356 437 ntBASIC21.19■□□□□ 0.98
COL16A1Q07092 AC006453.1-201ENST00000636037 1257 ntBASIC21.19■□□□□ 0.98
COL16A1Q07092 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 AC025271.4-201ENST00000621477 1726 ntBASIC21.19■□□□□ 0.98
COL16A1Q07092 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.19■□□□□ 0.98
COL16A1Q07092 HLA-A-202ENST00000376806 1854 ntBASIC21.19■□□□□ 0.98
COL16A1Q07092 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC21.19■□□□□ 0.98
COL16A1Q07092 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL16A1Q07092 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL16A1Q07092 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL16A1Q07092 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL16A1Q07092 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL16A1Q07092 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL16A1Q07092 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC21.18■□□□□ 0.98
COL16A1Q07092 AC078991.1-201ENST00000437297 610 ntBASIC21.18■□□□□ 0.98
COL16A1Q07092 AC242376.1-201ENST00000559033 726 ntBASIC21.18■□□□□ 0.98
COL16A1Q07092 AC012044.1-201ENST00000603431 297 ntBASIC21.18■□□□□ 0.98
COL16A1Q07092 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC21.18■□□□□ 0.98
COL16A1Q07092 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL16A1Q07092 AL592424.1-201ENST00000563624 1536 ntBASIC21.18■□□□□ 0.98
COL16A1Q07092 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL16A1Q07092 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
COL16A1Q07092 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL16A1Q07092 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
COL16A1Q07092 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
COL16A1Q07092 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL16A1Q07092 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL16A1Q07092 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
COL16A1Q07092 CMC1-204ENST00000423894 549 ntTSL 2 BASIC21.18■□□□□ 0.98
COL16A1Q07092 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC21.18■□□□□ 0.98
COL16A1Q07092 AC103691.2-201ENST00000618824 433 ntBASIC21.18■□□□□ 0.98
COL16A1Q07092 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC21.18■□□□□ 0.98
COL16A1Q07092 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.18■□□□□ 0.98
COL16A1Q07092 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL16A1Q07092 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.18■□□□□ 0.98
COL16A1Q07092 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL16A1Q07092 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL16A1Q07092 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
COL16A1Q07092 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL16A1Q07092 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
COL16A1Q07092 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL16A1Q07092 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.17■□□□□ 0.98
COL16A1Q07092 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.17■□□□□ 0.98
COL16A1Q07092 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC21.17■□□□□ 0.98
COL16A1Q07092 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC21.17■□□□□ 0.98
COL16A1Q07092 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL16A1Q07092 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL16A1Q07092 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL16A1Q07092 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL16A1Q07092 ISCA2P1-201ENST00000425548 448 ntBASIC21.17■□□□□ 0.98
COL16A1Q07092 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL16A1Q07092 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.17■□□□□ 0.98
COL16A1Q07092 AC106820.3-201ENST00000561653 397 ntBASIC21.17■□□□□ 0.98
COL16A1Q07092 MIR4754-201ENST00000582477 89 ntBASIC21.17■□□□□ 0.98
COL16A1Q07092 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC21.17■□□□□ 0.98
COL16A1Q07092 BNIP3P13-201ENST00000599968 566 ntBASIC21.17■□□□□ 0.98
COL16A1Q07092 AC092171.5-201ENST00000608012 942 ntBASIC21.17■□□□□ 0.98
COL16A1Q07092 PRSS30P-206ENST00000641773 873 ntBASIC21.17■□□□□ 0.98
COL16A1Q07092 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL16A1Q07092 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
COL16A1Q07092 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL16A1Q07092 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL16A1Q07092 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
COL16A1Q07092 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms