Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN7AQ01118 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN7AQ01118 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN7AQ01118 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN7AQ01118 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN7AQ01118 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN7AQ01118 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.69■□□□□ 0.74
SCN7AQ01118 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.69■□□□□ 0.74
SCN7AQ01118 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SCN7AQ01118 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.69■□□□□ 0.74
SCN7AQ01118 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.69■□□□□ 0.74
SCN7AQ01118 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN7AQ01118 RHOQP1-201ENST00000555758 579 ntBASIC19.69■□□□□ 0.74
SCN7AQ01118 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.69■□□□□ 0.74
SCN7AQ01118 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.69■□□□□ 0.74
SCN7AQ01118 ECM1P1-201ENST00000604092 1279 ntBASIC19.69■□□□□ 0.74
SCN7AQ01118 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.69■□□□□ 0.74
SCN7AQ01118 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN7AQ01118 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN7AQ01118 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN7AQ01118 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.69■□□□□ 0.74
SCN7AQ01118 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN7AQ01118 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.69■□□□□ 0.74
SCN7AQ01118 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN7AQ01118 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SCN7AQ01118 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.69■□□□□ 0.74
SCN7AQ01118 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SCN7AQ01118 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.69■□□□□ 0.74
SCN7AQ01118 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN7AQ01118 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.69■□□□□ 0.74
SCN7AQ01118 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN7AQ01118 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN7AQ01118 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN7AQ01118 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN7AQ01118 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SCN7AQ01118 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.68■□□□□ 0.74
SCN7AQ01118 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 KRT18P25-201ENST00000508931 1278 ntBASIC19.68■□□□□ 0.74
SCN7AQ01118 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.68■□□□□ 0.74
SCN7AQ01118 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN7AQ01118 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.68■□□□□ 0.74
SCN7AQ01118 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN7AQ01118 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.68■□□□□ 0.74
SCN7AQ01118 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
SCN7AQ01118 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.68■□□□□ 0.74
SCN7AQ01118 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.68■□□□□ 0.74
SCN7AQ01118 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SCN7AQ01118 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SCN7AQ01118 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.68■□□□□ 0.74
SCN7AQ01118 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SCN7AQ01118 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.68■□□□□ 0.74
SCN7AQ01118 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN7AQ01118 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN7AQ01118 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.68■□□□□ 0.74
SCN7AQ01118 EEF1DP1-201ENST00000585891 896 ntBASIC19.68■□□□□ 0.74
SCN7AQ01118 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.68■□□□□ 0.74
SCN7AQ01118 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 AL021578.1-201ENST00000613646 709 ntBASIC19.68■□□□□ 0.74
SCN7AQ01118 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.68■□□□□ 0.74
SCN7AQ01118 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN7AQ01118 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN7AQ01118 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN7AQ01118 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.67■□□□□ 0.74
SCN7AQ01118 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN7AQ01118 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.67■□□□□ 0.74
SCN7AQ01118 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN7AQ01118 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN7AQ01118 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN7AQ01118 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN7AQ01118 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN7AQ01118 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN7AQ01118 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
SCN7AQ01118 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SCN7AQ01118 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN7AQ01118 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SCN7AQ01118 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SCN7AQ01118 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN7AQ01118 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.67■□□□□ 0.74
SCN7AQ01118 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.67■□□□□ 0.74
SCN7AQ01118 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN7AQ01118 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN7AQ01118 AC106886.4-201ENST00000623557 2502 ntBASIC19.67■□□□□ 0.74
SCN7AQ01118 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms