Protein–RNA interactions for Protein: P62807

HIST1H2BC, Histone H2B type 1-C/E/F/G/I, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BCP62807 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 AC026271.3-201ENST00000571884 352 ntBASIC12.16□□□□□ -0.46
HIST1H2BCP62807 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 CR769767.2-201ENST00000622735 460 ntBASIC12.16□□□□□ -0.46
HIST1H2BCP62807 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H2BCP62807 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 FSCN1P1-201ENST00000568912 1481 ntBASIC12.15□□□□□ -0.46
HIST1H2BCP62807 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.15□□□□□ -0.46
HIST1H2BCP62807 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 TRIR-205ENST00000592273 783 ntTSL 3 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 AC024563.2-201ENST00000603282 481 ntBASIC12.15□□□□□ -0.46
HIST1H2BCP62807 MAZ-216ENST00000616501 991 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H2BCP62807 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.15□□□□□ -0.47
HIST1H2BCP62807 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
HIST1H2BCP62807 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.15□□□□□ -0.47
HIST1H2BCP62807 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HIST1H2BCP62807 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.15□□□□□ -0.47
HIST1H2BCP62807 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
HIST1H2BCP62807 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms