Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PTCHD3P3-201ENST00000403073 906 ntBASIC14.84□□□□□ -0.03
CDC42P60953 AL031133.1-201ENST00000406807 723 ntBASIC14.84□□□□□ -0.03
CDC42P60953 FAM210CP-201ENST00000445714 574 ntBASIC14.84□□□□□ -0.03
CDC42P60953 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 AC107918.2-201ENST00000530817 355 ntBASIC14.84□□□□□ -0.03
CDC42P60953 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.84□□□□□ -0.03
CDC42P60953 NKAPP1-205ENST00000585790 367 ntBASIC14.84□□□□□ -0.03
CDC42P60953 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDC42P60953 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDC42P60953 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CDC42P60953 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.84□□□□□ -0.03
CDC42P60953 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.84□□□□□ -0.03
CDC42P60953 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDC42P60953 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.84□□□□□ -0.03
CDC42P60953 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CDC42P60953 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDC42P60953 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC42P60953 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.83□□□□□ -0.03
CDC42P60953 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.83□□□□□ -0.03
CDC42P60953 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC42P60953 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC42P60953 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDC42P60953 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.83□□□□□ -0.03
CDC42P60953 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.83□□□□□ -0.03
CDC42P60953 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDC42P60953 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 AL009178.2-201ENST00000597278 2719 ntBASIC14.83□□□□□ -0.04
CDC42P60953 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC42P60953 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDC42P60953 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDC42P60953 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC42P60953 HAUS4P1-201ENST00000406739 1145 ntBASIC14.83□□□□□ -0.04
CDC42P60953 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC42P60953 AC106795.1-205ENST00000512851 1056 ntBASIC14.83□□□□□ -0.04
CDC42P60953 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.83□□□□□ -0.04
CDC42P60953 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDC42P60953 AL160237.2-201ENST00000556165 472 ntBASIC14.83□□□□□ -0.04
CDC42P60953 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC42P60953 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.83□□□□□ -0.04
CDC42P60953 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC42P60953 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.83□□□□□ -0.04
CDC42P60953 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.83□□□□□ -0.04
CDC42P60953 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDC42P60953 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.83□□□□□ -0.04
CDC42P60953 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.83□□□□□ -0.04
CDC42P60953 CICP13-201ENST00000422015 2789 ntBASIC14.83□□□□□ -0.04
CDC42P60953 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDC42P60953 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42P60953 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42P60953 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42P60953 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC42P60953 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42P60953 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDC42P60953 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42P60953 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42P60953 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42P60953 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42P60953 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.82□□□□□ -0.04
CDC42P60953 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42P60953 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CDC42P60953 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDC42P60953 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42P60953 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDC42P60953 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42P60953 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDC42P60953 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CDC42P60953 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.82□□□□□ -0.04
CDC42P60953 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.82□□□□□ -0.04
CDC42P60953 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms