Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH6P55285 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH6P55285 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH6P55285 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH6P55285 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH6P55285 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDH6P55285 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH6P55285 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH6P55285 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH6P55285 HTR5BP-201ENST00000430851 1154 ntBASIC16.83■□□□□ 0.28
CDH6P55285 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDH6P55285 TIMM8BP1-201ENST00000452384 211 ntBASIC16.83■□□□□ 0.28
CDH6P55285 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.83■□□□□ 0.28
CDH6P55285 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDH6P55285 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH6P55285 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH6P55285 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH6P55285 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH6P55285 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDH6P55285 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH6P55285 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDH6P55285 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
CDH6P55285 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH6P55285 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.83■□□□□ 0.28
CDH6P55285 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH6P55285 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH6P55285 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH6P55285 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.83■□□□□ 0.28
CDH6P55285 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.83■□□□□ 0.28
CDH6P55285 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH6P55285 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDH6P55285 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.83■□□□□ 0.28
CDH6P55285 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH6P55285 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH6P55285 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.83■□□□□ 0.28
CDH6P55285 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDH6P55285 AL162727.3-201ENST00000635661 2787 ntBASIC16.83■□□□□ 0.28
CDH6P55285 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDH6P55285 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH6P55285 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH6P55285 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH6P55285 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH6P55285 BX842568.4-201ENST00000421222 227 ntBASIC16.82■□□□□ 0.28
CDH6P55285 AC142381.1-201ENST00000426099 345 ntBASIC16.82■□□□□ 0.28
CDH6P55285 GPX1P2-201ENST00000429271 606 ntBASIC16.82■□□□□ 0.28
CDH6P55285 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH6P55285 SPCS2P4-201ENST00000436160 681 ntBASIC16.82■□□□□ 0.28
CDH6P55285 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.82■□□□□ 0.28
CDH6P55285 AC079140.1-201ENST00000508039 487 ntBASIC16.82■□□□□ 0.28
CDH6P55285 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH6P55285 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH6P55285 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH6P55285 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH6P55285 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH6P55285 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH6P55285 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH6P55285 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH6P55285 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CDH6P55285 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH6P55285 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH6P55285 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH6P55285 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDH6P55285 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH6P55285 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDH6P55285 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.82■□□□□ 0.28
CDH6P55285 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.82■□□□□ 0.28
CDH6P55285 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH6P55285 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH6P55285 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH6P55285 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH6P55285 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
CDH6P55285 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH6P55285 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH6P55285 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH6P55285 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDH6P55285 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CDH6P55285 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH6P55285 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH6P55285 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms