Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PMS1P54277 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.77■□□□□ 0.43
PMS1P54277 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.77■□□□□ 0.43
PMS1P54277 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
PMS1P54277 AC103702.1-201ENST00000548801 2630 ntBASIC17.77■□□□□ 0.43
PMS1P54277 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PMS1P54277 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PMS1P54277 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PMS1P54277 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PMS1P54277 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PMS1P54277 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.77■□□□□ 0.43
PMS1P54277 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PMS1P54277 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PMS1P54277 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PMS1P54277 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
PMS1P54277 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PMS1P54277 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.76■□□□□ 0.43
PMS1P54277 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.76■□□□□ 0.43
PMS1P54277 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
PMS1P54277 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 SPCS2P4-201ENST00000436160 681 ntBASIC17.76■□□□□ 0.43
PMS1P54277 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.76■□□□□ 0.43
PMS1P54277 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.76■□□□□ 0.43
PMS1P54277 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
PMS1P54277 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.76■□□□□ 0.43
PMS1P54277 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.76■□□□□ 0.43
PMS1P54277 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.76■□□□□ 0.43
PMS1P54277 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PMS1P54277 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
PMS1P54277 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 CROCCP1-201ENST00000426910 5675 ntBASIC17.76■□□□□ 0.43
PMS1P54277 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PMS1P54277 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.76■□□□□ 0.43
PMS1P54277 AP001282.1-201ENST00000531301 1499 ntBASIC17.75■□□□□ 0.43
PMS1P54277 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.75■□□□□ 0.43
PMS1P54277 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
PMS1P54277 AC022532.1-201ENST00000624563 1728 ntBASIC17.75■□□□□ 0.43
PMS1P54277 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.75■□□□□ 0.43
PMS1P54277 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PMS1P54277 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PMS1P54277 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PMS1P54277 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 AL022342.1-201ENST00000400363 863 ntBASIC17.75■□□□□ 0.43
PMS1P54277 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.75■□□□□ 0.43
PMS1P54277 AP000347.1-202ENST00000435868 847 ntBASIC17.75■□□□□ 0.43
PMS1P54277 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.75■□□□□ 0.43
PMS1P54277 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.75■□□□□ 0.43
PMS1P54277 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.75■□□□□ 0.43
PMS1P54277 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.75■□□□□ 0.43
PMS1P54277 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.75■□□□□ 0.43
PMS1P54277 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.75■□□□□ 0.43
PMS1P54277 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.75■□□□□ 0.43
PMS1P54277 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.75■□□□□ 0.43
PMS1P54277 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.75■□□□□ 0.43
PMS1P54277 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PMS1P54277 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms