Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
GTF2A1P52655 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC15.91■□□□□ 0.14
GTF2A1P52655 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.91■□□□□ 0.14
GTF2A1P52655 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.91■□□□□ 0.14
GTF2A1P52655 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
GTF2A1P52655 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 AC009949.1-201ENST00000623048 1830 ntBASIC15.91■□□□□ 0.14
GTF2A1P52655 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
GTF2A1P52655 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 AL359881.3-201ENST00000602640 1721 ntBASIC15.91■□□□□ 0.14
GTF2A1P52655 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GTF2A1P52655 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.9■□□□□ 0.14
GTF2A1P52655 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GTF2A1P52655 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.9■□□□□ 0.14
GTF2A1P52655 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
GTF2A1P52655 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.9■□□□□ 0.14
GTF2A1P52655 DGCR10-201ENST00000609839 495 ntBASIC15.9■□□□□ 0.14
GTF2A1P52655 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC15.9■□□□□ 0.14
GTF2A1P52655 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.9■□□□□ 0.14
GTF2A1P52655 MROH4P-201ENST00000431302 1578 ntBASIC15.9■□□□□ 0.14
GTF2A1P52655 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
GTF2A1P52655 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GTF2A1P52655 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.9■□□□□ 0.14
GTF2A1P52655 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
GTF2A1P52655 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
GTF2A1P52655 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.9■□□□□ 0.14
GTF2A1P52655 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.9■□□□□ 0.14
GTF2A1P52655 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
GTF2A1P52655 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC15.9■□□□□ 0.14
GTF2A1P52655 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
GTF2A1P52655 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
GTF2A1P52655 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.89■□□□□ 0.13
GTF2A1P52655 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.89■□□□□ 0.13
GTF2A1P52655 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
GTF2A1P52655 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
GTF2A1P52655 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
GTF2A1P52655 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
GTF2A1P52655 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 AC116562.2-201ENST00000507042 360 ntBASIC15.89■□□□□ 0.13
GTF2A1P52655 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.89■□□□□ 0.13
GTF2A1P52655 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.89■□□□□ 0.13
GTF2A1P52655 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.89■□□□□ 0.13
GTF2A1P52655 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.89■□□□□ 0.13
GTF2A1P52655 AC116407.2-201ENST00000613639 860 ntBASIC15.89■□□□□ 0.13
GTF2A1P52655 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 HSPA7-201ENST00000445535 1927 ntBASIC15.89■□□□□ 0.13
GTF2A1P52655 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
GTF2A1P52655 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms