Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FNTAP49354 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.82■□□□□ 0.28
FNTAP49354 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FNTAP49354 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNTAP49354 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNTAP49354 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.82■□□□□ 0.28
FNTAP49354 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNTAP49354 AC005089.1-201ENST00000619486 2241 ntBASIC16.82■□□□□ 0.28
FNTAP49354 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNTAP49354 AC006486.2-201ENST00000624246 2199 ntBASIC16.82■□□□□ 0.28
FNTAP49354 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNTAP49354 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.82■□□□□ 0.28
FNTAP49354 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
FNTAP49354 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNTAP49354 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FNTAP49354 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FNTAP49354 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.82■□□□□ 0.28
FNTAP49354 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FNTAP49354 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.82■□□□□ 0.28
FNTAP49354 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
FNTAP49354 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
FNTAP49354 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
FNTAP49354 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.81■□□□□ 0.28
FNTAP49354 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 AP002414.3-201ENST00000589352 1468 ntBASIC16.81■□□□□ 0.28
FNTAP49354 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.81■□□□□ 0.28
FNTAP49354 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.81■□□□□ 0.28
FNTAP49354 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.81■□□□□ 0.28
FNTAP49354 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
FNTAP49354 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.81■□□□□ 0.28
FNTAP49354 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FNTAP49354 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.81■□□□□ 0.28
FNTAP49354 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.81■□□□□ 0.28
FNTAP49354 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.81■□□□□ 0.28
FNTAP49354 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
FNTAP49354 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.81■□□□□ 0.28
FNTAP49354 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.81■□□□□ 0.28
FNTAP49354 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
FNTAP49354 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
FNTAP49354 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
FNTAP49354 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.81■□□□□ 0.28
FNTAP49354 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
FNTAP49354 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FNTAP49354 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
FNTAP49354 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 GRK6P1-201ENST00000400595 1711 ntBASIC16.8■□□□□ 0.28
FNTAP49354 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FNTAP49354 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 AC018712.1-201ENST00000455767 687 ntBASIC16.8■□□□□ 0.28
FNTAP49354 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.8■□□□□ 0.28
FNTAP49354 AC109635.5-201ENST00000533593 962 ntBASIC16.8■□□□□ 0.28
FNTAP49354 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.8■□□□□ 0.28
FNTAP49354 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
FNTAP49354 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.8■□□□□ 0.28
FNTAP49354 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
FNTAP49354 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FNTAP49354 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms