Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SLC1A3P43003 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC1A3P43003 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SLC1A3P43003 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SLC1A3P43003 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A3P43003 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SLC1A3P43003 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SLC1A3P43003 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC1A3P43003 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A3P43003 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC1A3P43003 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC1A3P43003 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
SLC1A3P43003 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SLC1A3P43003 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC1A3P43003 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 MCCD1P2-201ENST00000423228 335 ntBASIC14.9□□□□□ -0.02
SLC1A3P43003 POLD2P1-201ENST00000511220 997 ntBASIC14.9□□□□□ -0.02
SLC1A3P43003 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 PGAM5P1-201ENST00000518923 814 ntBASIC14.9□□□□□ -0.02
SLC1A3P43003 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC1A3P43003 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC1A3P43003 AC091812.2-201ENST00000619081 385 ntBASIC14.9□□□□□ -0.02
SLC1A3P43003 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.9□□□□□ -0.02
SLC1A3P43003 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC1A3P43003 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A3P43003 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC1A3P43003 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A3P43003 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SLC1A3P43003 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A3P43003 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A3P43003 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SLC1A3P43003 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A3P43003 AKAP8P1-201ENST00000434743 1349 ntBASIC14.9□□□□□ -0.02
SLC1A3P43003 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SLC1A3P43003 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 AC022532.1-201ENST00000624563 1728 ntBASIC14.89□□□□□ -0.03
SLC1A3P43003 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SLC1A3P43003 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SLC1A3P43003 AC073347.1-201ENST00000421633 2643 ntBASIC14.89□□□□□ -0.03
SLC1A3P43003 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
SLC1A3P43003 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC1A3P43003 AC004832.2-201ENST00000426397 482 ntBASIC14.89□□□□□ -0.03
SLC1A3P43003 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC1A3P43003 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 PRYP6-201ENST00000514804 343 ntBASIC14.89□□□□□ -0.03
SLC1A3P43003 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.89□□□□□ -0.03
SLC1A3P43003 FAM86C2P-203ENST00000528684 1004 ntBASIC14.89□□□□□ -0.03
SLC1A3P43003 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.89□□□□□ -0.03
SLC1A3P43003 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC1A3P43003 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC1A3P43003 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
SLC1A3P43003 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC1A3P43003 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SLC1A3P43003 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SLC1A3P43003 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC1A3P43003 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
SLC1A3P43003 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms