Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
APOBEC1P41238 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
APOBEC1P41238 AL596442.2-201ENST00000610240 980 ntBASIC14.62□□□□□ -0.07
APOBEC1P41238 AC018529.1-201ENST00000613063 361 ntBASIC14.62□□□□□ -0.07
APOBEC1P41238 AL691403.2-201ENST00000618460 490 ntBASIC14.62□□□□□ -0.07
APOBEC1P41238 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOBEC1P41238 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.62□□□□□ -0.07
APOBEC1P41238 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
APOBEC1P41238 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOBEC1P41238 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
APOBEC1P41238 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
APOBEC1P41238 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.62□□□□□ -0.07
APOBEC1P41238 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOBEC1P41238 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOBEC1P41238 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOBEC1P41238 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.62□□□□□ -0.07
APOBEC1P41238 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOBEC1P41238 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOBEC1P41238 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.61□□□□□ -0.07
APOBEC1P41238 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
APOBEC1P41238 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
APOBEC1P41238 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
APOBEC1P41238 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
APOBEC1P41238 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.61□□□□□ -0.07
APOBEC1P41238 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 AL365203.3-201ENST00000609742 2057 ntBASIC14.61□□□□□ -0.07
APOBEC1P41238 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 AL691432.1-201ENST00000596308 1422 ntBASIC14.61□□□□□ -0.07
APOBEC1P41238 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
APOBEC1P41238 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
APOBEC1P41238 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 GPS2P2-201ENST00000430745 888 ntBASIC14.61□□□□□ -0.07
APOBEC1P41238 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.61□□□□□ -0.07
APOBEC1P41238 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.61□□□□□ -0.07
APOBEC1P41238 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.61□□□□□ -0.07
APOBEC1P41238 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.61□□□□□ -0.07
APOBEC1P41238 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.61□□□□□ -0.07
APOBEC1P41238 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.61□□□□□ -0.07
APOBEC1P41238 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.61□□□□□ -0.07
APOBEC1P41238 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.61□□□□□ -0.07
APOBEC1P41238 AP001059.3-201ENST00000619053 235 ntBASIC14.61□□□□□ -0.07
APOBEC1P41238 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.61□□□□□ -0.07
APOBEC1P41238 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
APOBEC1P41238 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
APOBEC1P41238 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
APOBEC1P41238 AC112504.1-201ENST00000623415 1841 ntBASIC14.61□□□□□ -0.07
APOBEC1P41238 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.61□□□□□ -0.07
APOBEC1P41238 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
APOBEC1P41238 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBEC1P41238 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 AC011477.6-201ENST00000604980 1927 ntBASIC14.6□□□□□ -0.07
APOBEC1P41238 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.6□□□□□ -0.07
APOBEC1P41238 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.6□□□□□ -0.07
APOBEC1P41238 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.6□□□□□ -0.07
APOBEC1P41238 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
APOBEC1P41238 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 AC004987.2-201ENST00000395959 1148 ntBASIC14.6□□□□□ -0.07
APOBEC1P41238 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.6□□□□□ -0.07
APOBEC1P41238 SPDYE7P-202ENST00000420373 878 ntBASIC14.6□□□□□ -0.07
APOBEC1P41238 RPS8P6-201ENST00000426177 609 ntBASIC14.6□□□□□ -0.07
APOBEC1P41238 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.6□□□□□ -0.07
APOBEC1P41238 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.6□□□□□ -0.07
APOBEC1P41238 AC026150.2-201ENST00000564693 1156 ntBASIC14.6□□□□□ -0.07
APOBEC1P41238 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.6□□□□□ -0.07
APOBEC1P41238 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.6□□□□□ -0.07
APOBEC1P41238 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.6□□□□□ -0.07
APOBEC1P41238 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
APOBEC1P41238 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOBEC1P41238 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms