Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.39■□□□□ 0.21
HADHAP40939 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HADHAP40939 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HADHAP40939 NORAD-201ENST00000565493 5339 ntBASIC16.38■□□□□ 0.21
HADHAP40939 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.38■□□□□ 0.21
HADHAP40939 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HADHAP40939 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.38■□□□□ 0.21
HADHAP40939 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.38■□□□□ 0.21
HADHAP40939 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.38■□□□□ 0.21
HADHAP40939 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.38■□□□□ 0.21
HADHAP40939 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HADHAP40939 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.38■□□□□ 0.21
HADHAP40939 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.38■□□□□ 0.21
HADHAP40939 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HADHAP40939 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.38■□□□□ 0.21
HADHAP40939 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.38■□□□□ 0.21
HADHAP40939 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.38■□□□□ 0.21
HADHAP40939 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.38■□□□□ 0.21
HADHAP40939 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.38■□□□□ 0.21
HADHAP40939 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.38■□□□□ 0.21
HADHAP40939 AC005829.1-201ENST00000570002 483 ntBASIC16.38■□□□□ 0.21
HADHAP40939 MIR3687-2-201ENST00000577708 61 ntBASIC16.38■□□□□ 0.21
HADHAP40939 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.38■□□□□ 0.21
HADHAP40939 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HADHAP40939 AC026120.1-201ENST00000611536 926 ntBASIC16.38■□□□□ 0.21
HADHAP40939 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
HADHAP40939 MIR3687-1-201ENST00000614492 61 ntBASIC16.38■□□□□ 0.21
HADHAP40939 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.38■□□□□ 0.21
HADHAP40939 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HADHAP40939 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HADHAP40939 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HADHAP40939 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.38■□□□□ 0.21
HADHAP40939 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.38■□□□□ 0.21
HADHAP40939 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HADHAP40939 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.37■□□□□ 0.21
HADHAP40939 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.37■□□□□ 0.21
HADHAP40939 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 PAUPAR-201ENST00000630360 2965 ntBASIC16.37■□□□□ 0.21
HADHAP40939 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.37■□□□□ 0.21
HADHAP40939 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
HADHAP40939 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.37■□□□□ 0.21
HADHAP40939 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.37■□□□□ 0.21
HADHAP40939 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.37■□□□□ 0.21
HADHAP40939 ADH5P3-201ENST00000433842 1137 ntBASIC16.37■□□□□ 0.21
HADHAP40939 SPDYE11-202ENST00000450699 704 ntBASIC16.37■□□□□ 0.21
HADHAP40939 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.37■□□□□ 0.21
HADHAP40939 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.37■□□□□ 0.21
HADHAP40939 AC105233.2-201ENST00000523697 349 ntBASIC16.37■□□□□ 0.21
HADHAP40939 AF228730.5-201ENST00000530288 346 ntBASIC16.37■□□□□ 0.21
HADHAP40939 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.37■□□□□ 0.21
HADHAP40939 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.37■□□□□ 0.21
HADHAP40939 SPDYE9P-201ENST00000570642 692 ntBASIC16.37■□□□□ 0.21
HADHAP40939 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
HADHAP40939 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.37■□□□□ 0.21
HADHAP40939 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.37■□□□□ 0.21
HADHAP40939 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
HADHAP40939 AL365330.1-201ENST00000607459 531 ntBASIC16.37■□□□□ 0.21
HADHAP40939 SPDYE10P-202ENST00000612005 668 ntBASIC16.37■□□□□ 0.21
HADHAP40939 SPDYE8P-202ENST00000612377 668 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms