Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CLCN1P35523 AC097637.2-201ENST00000624096 1997 ntBASIC18.46■□□□□ 0.55
CLCN1P35523 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCN1P35523 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLCN1P35523 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.46■□□□□ 0.55
CLCN1P35523 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.46■□□□□ 0.54
CLCN1P35523 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC18.46■□□□□ 0.54
CLCN1P35523 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CLCN1P35523 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCN1P35523 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCN1P35523 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCN1P35523 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.45■□□□□ 0.54
CLCN1P35523 AC106795.1-205ENST00000512851 1056 ntBASIC18.45■□□□□ 0.54
CLCN1P35523 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.45■□□□□ 0.54
CLCN1P35523 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCN1P35523 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCN1P35523 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CLCN1P35523 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
CLCN1P35523 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 AC091951.1-201ENST00000512854 2465 ntBASIC18.45■□□□□ 0.54
CLCN1P35523 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CLCN1P35523 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCN1P35523 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCN1P35523 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC18.45■□□□□ 0.54
CLCN1P35523 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.45■□□□□ 0.54
CLCN1P35523 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLCN1P35523 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.44■□□□□ 0.54
CLCN1P35523 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLCN1P35523 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCN1P35523 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.44■□□□□ 0.54
CLCN1P35523 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLCN1P35523 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLCN1P35523 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CLCN1P35523 TSPY19P-201ENST00000418461 509 ntBASIC18.44■□□□□ 0.54
CLCN1P35523 TSPY18P-201ENST00000441642 509 ntBASIC18.44■□□□□ 0.54
CLCN1P35523 KRT18P31-201ENST00000506277 1292 ntBASIC18.44■□□□□ 0.54
CLCN1P35523 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CLCN1P35523 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.44■□□□□ 0.54
CLCN1P35523 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.44■□□□□ 0.54
CLCN1P35523 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.44■□□□□ 0.54
CLCN1P35523 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCN1P35523 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.44■□□□□ 0.54
CLCN1P35523 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.44■□□□□ 0.54
CLCN1P35523 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC18.44■□□□□ 0.54
CLCN1P35523 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 GGT3P-204ENST00000453783 1664 ntBASIC18.44■□□□□ 0.54
CLCN1P35523 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLCN1P35523 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
CLCN1P35523 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLCN1P35523 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN1P35523 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC18.43■□□□□ 0.54
CLCN1P35523 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CLCN1P35523 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CLCN1P35523 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CLCN1P35523 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN1P35523 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN1P35523 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN1P35523 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN1P35523 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN1P35523 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN1P35523 ACTG1P4-201ENST00000425123 1122 ntBASIC18.43■□□□□ 0.54
CLCN1P35523 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.43■□□□□ 0.54
CLCN1P35523 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.43■□□□□ 0.54
CLCN1P35523 AC017007.3-201ENST00000479865 435 ntBASIC18.43■□□□□ 0.54
CLCN1P35523 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.43■□□□□ 0.54
CLCN1P35523 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLCN1P35523 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms