Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TM4SF1P30408 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.76■□□□□ 0.75
TM4SF1P30408 AC007969.1-201ENST00000433675 447 ntBASIC19.76■□□□□ 0.75
TM4SF1P30408 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 Z93015.1-201ENST00000451718 390 ntBASIC19.76■□□□□ 0.75
TM4SF1P30408 KRT18P43-201ENST00000469825 1281 ntBASIC19.76■□□□□ 0.75
TM4SF1P30408 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.76■□□□□ 0.75
TM4SF1P30408 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.76■□□□□ 0.75
TM4SF1P30408 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.76■□□□□ 0.75
TM4SF1P30408 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.76■□□□□ 0.75
TM4SF1P30408 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TM4SF1P30408 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
TM4SF1P30408 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.76■□□□□ 0.75
TM4SF1P30408 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF1P30408 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TM4SF1P30408 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF1P30408 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TM4SF1P30408 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF1P30408 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF1P30408 AL138709.1-201ENST00000614840 1693 ntBASIC19.75■□□□□ 0.75
TM4SF1P30408 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TM4SF1P30408 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.75■□□□□ 0.75
TM4SF1P30408 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF1P30408 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF1P30408 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF1P30408 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.75■□□□□ 0.75
TM4SF1P30408 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF1P30408 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TM4SF1P30408 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF1P30408 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.75■□□□□ 0.75
TM4SF1P30408 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.75■□□□□ 0.75
TM4SF1P30408 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.75■□□□□ 0.75
TM4SF1P30408 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.75■□□□□ 0.75
TM4SF1P30408 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.75■□□□□ 0.75
TM4SF1P30408 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.75■□□□□ 0.75
TM4SF1P30408 AC132938.4-201ENST00000623835 848 ntBASIC19.75■□□□□ 0.75
TM4SF1P30408 AC106820.2-201ENST00000563775 3264 ntBASIC19.75■□□□□ 0.75
TM4SF1P30408 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF1P30408 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.75■□□□□ 0.75
TM4SF1P30408 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.75■□□□□ 0.75
TM4SF1P30408 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TM4SF1P30408 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.75■□□□□ 0.75
TM4SF1P30408 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF1P30408 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF1P30408 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.74■□□□□ 0.75
TM4SF1P30408 AP001282.1-201ENST00000531301 1499 ntBASIC19.74■□□□□ 0.75
TM4SF1P30408 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF1P30408 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TM4SF1P30408 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF1P30408 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF1P30408 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TM4SF1P30408 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.74■□□□□ 0.75
TM4SF1P30408 BTBD6P1-201ENST00000412176 1267 ntBASIC19.74■□□□□ 0.75
TM4SF1P30408 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.74■□□□□ 0.75
TM4SF1P30408 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.74■□□□□ 0.75
TM4SF1P30408 ACTG1P17-201ENST00000558391 1119 ntBASIC19.74■□□□□ 0.75
TM4SF1P30408 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.74■□□□□ 0.75
TM4SF1P30408 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF1P30408 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF1P30408 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF1P30408 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF1P30408 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF1P30408 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TM4SF1P30408 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF1P30408 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.74■□□□□ 0.75
TM4SF1P30408 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF1P30408 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.74■□□□□ 0.75
TM4SF1P30408 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TM4SF1P30408 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TM4SF1P30408 AC134407.2-201ENST00000625089 1978 ntBASIC19.74■□□□□ 0.75
TM4SF1P30408 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.73■□□□□ 0.75
TM4SF1P30408 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.73■□□□□ 0.75
TM4SF1P30408 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.73■□□□□ 0.75
TM4SF1P30408 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.73■□□□□ 0.75
TM4SF1P30408 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.73■□□□□ 0.75
TM4SF1P30408 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
TM4SF1P30408 GAPDHP40-201ENST00000505218 1006 ntBASIC19.73■□□□□ 0.75
TM4SF1P30408 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.73■□□□□ 0.75
TM4SF1P30408 AC015910.1-201ENST00000579400 975 ntBASIC19.73■□□□□ 0.75
TM4SF1P30408 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.73■□□□□ 0.75
TM4SF1P30408 AC107373.2-201ENST00000607735 490 ntBASIC19.73■□□□□ 0.75
TM4SF1P30408 AC005695.3-201ENST00000614522 232 ntBASIC19.73■□□□□ 0.75
TM4SF1P30408 AC145423.3-201ENST00000615987 467 ntBASIC19.73■□□□□ 0.75
TM4SF1P30408 AC244452.3-201ENST00000636814 210 ntBASIC19.73■□□□□ 0.75
TM4SF1P30408 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF1P30408 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.73■□□□□ 0.75
TM4SF1P30408 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms