Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 REXO1L1P-202ENST00000608646 1974 ntBASIC17.9■□□□□ 0.46
CTGFP29279 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CTGFP29279 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTGFP29279 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
CTGFP29279 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTGFP29279 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTGFP29279 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 HLA-A-202ENST00000376806 1854 ntBASIC17.89■□□□□ 0.45
CTGFP29279 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.89■□□□□ 0.45
CTGFP29279 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.89■□□□□ 0.45
CTGFP29279 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CTGFP29279 AC132938.4-201ENST00000623835 848 ntBASIC17.89■□□□□ 0.45
CTGFP29279 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTGFP29279 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.88■□□□□ 0.45
CTGFP29279 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTGFP29279 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CTGFP29279 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.88■□□□□ 0.45
CTGFP29279 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTGFP29279 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CTGFP29279 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CTGFP29279 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.88■□□□□ 0.45
CTGFP29279 POU5F1P6-201ENST00000466990 990 ntBASIC17.88■□□□□ 0.45
CTGFP29279 RN7SL769P-201ENST00000469386 295 ntBASIC17.88■□□□□ 0.45
CTGFP29279 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.88■□□□□ 0.45
CTGFP29279 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.88■□□□□ 0.45
CTGFP29279 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.88■□□□□ 0.45
CTGFP29279 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.88■□□□□ 0.45
CTGFP29279 SPCS2P2-201ENST00000603270 608 ntBASIC17.88■□□□□ 0.45
CTGFP29279 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.88■□□□□ 0.45
CTGFP29279 AP005019.2-201ENST00000615104 511 ntBASIC17.88■□□□□ 0.45
CTGFP29279 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.88■□□□□ 0.45
CTGFP29279 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.88■□□□□ 0.45
CTGFP29279 AC006453.4-201ENST00000636949 1252 ntBASIC17.88■□□□□ 0.45
CTGFP29279 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTGFP29279 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.88■□□□□ 0.45
CTGFP29279 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.88■□□□□ 0.45
CTGFP29279 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.88■□□□□ 0.45
CTGFP29279 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTGFP29279 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CTGFP29279 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTGFP29279 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.88■□□□□ 0.45
CTGFP29279 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTGFP29279 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTGFP29279 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.87■□□□□ 0.45
CTGFP29279 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CTGFP29279 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.87■□□□□ 0.45
CTGFP29279 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.87■□□□□ 0.45
CTGFP29279 RPS2P36-201ENST00000456516 831 ntBASIC17.87■□□□□ 0.45
CTGFP29279 GAPDHP40-201ENST00000505218 1006 ntBASIC17.87■□□□□ 0.45
CTGFP29279 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 RNA5SP486-201ENST00000515961 83 ntBASIC17.87■□□□□ 0.45
CTGFP29279 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.87■□□□□ 0.45
CTGFP29279 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.87■□□□□ 0.45
CTGFP29279 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.87■□□□□ 0.45
CTGFP29279 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.87■□□□□ 0.45
CTGFP29279 AL450472.2-201ENST00000603663 1156 ntBASIC17.87■□□□□ 0.45
CTGFP29279 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.87■□□□□ 0.45
CTGFP29279 AC128714.1-201ENST00000637035 887 ntBASIC17.87■□□□□ 0.45
CTGFP29279 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CTGFP29279 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CTGFP29279 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.87■□□□□ 0.45
CTGFP29279 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTGFP29279 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms