Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.9□□□□□ -0.18
CD40P25942 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.9□□□□□ -0.18
CD40P25942 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.9□□□□□ -0.18
CD40P25942 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.9□□□□□ -0.18
CD40P25942 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.9□□□□□ -0.18
CD40P25942 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40P25942 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.9□□□□□ -0.18
CD40P25942 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD40P25942 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.9□□□□□ -0.18
CD40P25942 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD40P25942 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD40P25942 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40P25942 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40P25942 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40P25942 AC009053.2-201ENST00000563701 2365 ntBASIC13.9□□□□□ -0.18
CD40P25942 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CD40P25942 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CD40P25942 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40P25942 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40P25942 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40P25942 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CD40P25942 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CD40P25942 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40P25942 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD40P25942 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CD40P25942 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.89□□□□□ -0.19
CD40P25942 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.89□□□□□ -0.19
CD40P25942 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.89□□□□□ -0.19
CD40P25942 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
CD40P25942 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.89□□□□□ -0.19
CD40P25942 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CD40P25942 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.89□□□□□ -0.19
CD40P25942 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CD40P25942 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CD40P25942 CRB3P1-201ENST00000449338 276 ntBASIC13.89□□□□□ -0.19
CD40P25942 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.89□□□□□ -0.19
CD40P25942 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CD40P25942 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.89□□□□□ -0.19
CD40P25942 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.89□□□□□ -0.19
CD40P25942 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.89□□□□□ -0.19
CD40P25942 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.89□□□□□ -0.19
CD40P25942 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.89□□□□□ -0.19
CD40P25942 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.89□□□□□ -0.19
CD40P25942 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.89□□□□□ -0.19
CD40P25942 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.89□□□□□ -0.19
CD40P25942 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.89□□□□□ -0.19
CD40P25942 PCDHA12-202ENST00000613593 2588 ntBASIC13.89□□□□□ -0.19
CD40P25942 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CD40P25942 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CD40P25942 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CD40P25942 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.89□□□□□ -0.19
CD40P25942 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CD40P25942 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.89□□□□□ -0.19
CD40P25942 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD40P25942 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.89□□□□□ -0.19
CD40P25942 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CD40P25942 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40P25942 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40P25942 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.88□□□□□ -0.19
CD40P25942 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD40P25942 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.88□□□□□ -0.19
CD40P25942 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CD40P25942 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40P25942 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40P25942 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40P25942 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40P25942 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.88□□□□□ -0.19
CD40P25942 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD40P25942 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40P25942 AC114501.2-201ENST00000439631 535 ntBASIC13.88□□□□□ -0.19
CD40P25942 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40P25942 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.88□□□□□ -0.19
CD40P25942 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40P25942 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CD40P25942 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD40P25942 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40P25942 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.88□□□□□ -0.19
CD40P25942 AC104794.3-201ENST00000566840 1248 ntBASIC13.88□□□□□ -0.19
CD40P25942 AC027307.3-201ENST00000594262 1100 ntBASIC13.88□□□□□ -0.19
CD40P25942 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms