Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
LMNB1P20700 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
LMNB1P20700 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
LMNB1P20700 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LMNB1P20700 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.4■□□□□ 0.7
LMNB1P20700 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LMNB1P20700 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.4■□□□□ 0.7
LMNB1P20700 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LMNB1P20700 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMNB1P20700 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LMNB1P20700 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
LMNB1P20700 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
LMNB1P20700 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
LMNB1P20700 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LMNB1P20700 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.39■□□□□ 0.69
LMNB1P20700 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMNB1P20700 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LMNB1P20700 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMNB1P20700 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMNB1P20700 ACKR1-201ENST00000368121 1240 ntBASIC19.39■□□□□ 0.69
LMNB1P20700 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.39■□□□□ 0.69
LMNB1P20700 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.39■□□□□ 0.69
LMNB1P20700 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.39■□□□□ 0.69
LMNB1P20700 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.39■□□□□ 0.69
LMNB1P20700 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.39■□□□□ 0.69
LMNB1P20700 RPS2P36-201ENST00000456516 831 ntBASIC19.39■□□□□ 0.69
LMNB1P20700 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMNB1P20700 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.39■□□□□ 0.69
LMNB1P20700 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.39■□□□□ 0.69
LMNB1P20700 AC025279.2-201ENST00000569730 653 ntBASIC19.39■□□□□ 0.69
LMNB1P20700 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.39■□□□□ 0.69
LMNB1P20700 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.39■□□□□ 0.69
LMNB1P20700 MIR3619-201ENST00000579667 83 ntBASIC19.39■□□□□ 0.69
LMNB1P20700 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.39■□□□□ 0.69
LMNB1P20700 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.39■□□□□ 0.69
LMNB1P20700 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LMNB1P20700 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMNB1P20700 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.39■□□□□ 0.69
LMNB1P20700 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.39■□□□□ 0.69
LMNB1P20700 GGT4P-201ENST00000623672 1708 ntBASIC19.39■□□□□ 0.69
LMNB1P20700 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMNB1P20700 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LMNB1P20700 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.39■□□□□ 0.69
LMNB1P20700 AC092068.3-201ENST00000587894 2016 ntBASIC19.39■□□□□ 0.69
LMNB1P20700 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LMNB1P20700 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LMNB1P20700 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.39■□□□□ 0.69
LMNB1P20700 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMNB1P20700 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMNB1P20700 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
LMNB1P20700 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
LMNB1P20700 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LMNB1P20700 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LMNB1P20700 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LMNB1P20700 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LMNB1P20700 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LMNB1P20700 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.38■□□□□ 0.69
LMNB1P20700 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LMNB1P20700 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.38■□□□□ 0.69
LMNB1P20700 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.38■□□□□ 0.69
LMNB1P20700 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
LMNB1P20700 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LMNB1P20700 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.38■□□□□ 0.69
LMNB1P20700 AP002490.2-201ENST00000524791 560 ntBASIC19.38■□□□□ 0.69
LMNB1P20700 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LMNB1P20700 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LMNB1P20700 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.38■□□□□ 0.69
LMNB1P20700 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.38■□□□□ 0.69
LMNB1P20700 MIR4741-201ENST00000579822 90 ntBASIC19.38■□□□□ 0.69
LMNB1P20700 AC104982.3-201ENST00000581995 514 ntBASIC19.38■□□□□ 0.69
LMNB1P20700 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.38■□□□□ 0.69
LMNB1P20700 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 SPCS2P2-201ENST00000603270 608 ntBASIC19.38■□□□□ 0.69
LMNB1P20700 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LMNB1P20700 AC128714.1-201ENST00000637035 887 ntBASIC19.38■□□□□ 0.69
LMNB1P20700 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.38■□□□□ 0.69
LMNB1P20700 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms